Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891963.1_cds_XP_016446862.1_41677
CDS Infomation

[gene=LOC107771914] [db_xref=GeneID:107771914] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016446862.1] [location=complement(join(19542..20156,20291..21205))] [gbkey=CDS]
Sequence

ATGGAGACACAACACTTCCCTTTCATTTTCATTTCACTCTTGATATTCCTTTCTTTCATC
TTTCGATTTGTTCTGATACGGAAGAATTCAAGAATCGTTACCAAAAGATTGCCTCCAGGG
CCATGGAGTCTACCTTTAATCGGGAACTTGCACCAATTAATGAATGGTCGCCTTCCAATA
CATCATACTCTCAGAAGTCTATCGCAAAGATATGGACCGATCTTTCACTTATGTCTTGGC
GAAATATCGATTATTGTTGTATCTTCACCTGAGATGGCAAAAGAAATTATGAAAACTCAA
GACCTTCGCTTTGCTACTAGGCCTGAATTTATGTCTGGAGATATTATTTTCTACAATTAT
ACAGACATTGGAACTTGTCCATATGGTGAATACTGGAGAAATATGCGCAAAGTGTGTGTC
CTGGAACTTCTTAGTGCAAAGATGGTCAAGTCATTTAATTCAATTCGACAAGAAGAGATG
TCAAGTCTCATTTCATCGATTAATTCAACTCCTGATGACTCATTGATCAACTTATCAGAC
AAAATGTTTTGGTTTACAAGTTCTGTAACTTGTAGATCAGCTTTCGGGAAAGTGATTCAT
GATCAAGATAAGTTGATAATGTTGGTGAAAGACGTAACATTATTAGCTGGTGGATTTGAC
TTGGCTGATTTGTTCCCTTCCCGAAAATGGCTTCACGAGATCAGTGGATTGAAGTCCAAA
ATGTTGAAAGTTCACACAAAAATAGATGTAATTTTGGAGAATATCATTAATGAGCATCGG
AATAATCGAAAAATTGGTAAGAAGGGCAATGGTGAGTCTGGAGGTGAAGATTTGATAGAT
GTTCTACTACGAGTCATGGAGAGTGGCGAATTGGGAACTCCAATCACAAATAAGAATATC
AAAGGTGTTATTTTCGACATGTTCTTAGCAGGAGCAGAAACCTCATCTACAACAATTATT
TGGGCATTGGCTGAAATGATAAGAAATCCAAATGTTATGGCTAAAGCACAACTTGAAGTT
AGAGAAGTCCTAAAAGGAAAGAGAACATTTGAGGATTCTGATATAGAAGAGTTGAAGTAT
CTAAAATTAGTGATTAAAGAAACATTAAGGTTGCACCCTCCTATTCCTCTATTACTCCCA
AGAGAATGCAGAGAAGAAACAAAAATTGAACAATACACAATACCTATCAAAACTAGAGTC
CTAGTGAATGCTTGGGCCATTGGAAGAGATACTAGATATTGGCATGATTCAGAAAGTTTT
ATACCTGAGAGATTTGAGAATAATTCTATTGATTTCAAAGGAAATCACTTTGAATTTATT
CCGTTTGGTGCAGGACGAAGAATGTGTCCAGGTTTATTATTCGGTTTAGTTAATGTAGGA
CATCCTTTAGCTCAATTGCTTTATCACTTCGATTGGAAGACTCTTCCTGGGATAAGTTCA
GATAGTTTCGACATGACTGAAACAGATGGAGTAACTGCCGGAAGAAAGGATGATCTTTGT
TTAATTGCTACTCCTTTTGGTCTCAATTAA

Peptide Sequence

PEP ID

XP_016446862.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

METQHFPFIFISLLIFLSFIFRFVLIRKNSRIVTKRLPPGPWSLPLIGNLHQLMNGRLPI
HHTLRSLSQRYGPIFHLCLGEISIIVVSSPEMAKEIMKTQDLRFATRPEFMSGDIIFYNY
TDIGTCPYGEYWRNMRKVCVLELLSAKMVKSFNSIRQEEMSSLISSINSTPDDSLINLSD
KMFWFTSSVTCRSAFGKVIHDQDKLIMLVKDVTLLAGGFDLADLFPSRKWLHEISGLKSK
MLKVHTKIDVILENIINEHRNNRKIGKKGNGESGGEDLIDVLLRVMESGELGTPITNKNI
KGVIFDMFLAGAETSSTTIIWALAEMIRNPNVMAKAQLEVREVLKGKRTFEDSDIEELKY
LKLVIKETLRLHPPIPLLLPRECREETKIEQYTIPIKTRVLVNAWAIGRDTRYWHDSESF
IPERFENNSIDFKGNHFEFIPFGAGRRMCPGLLFGLVNVGHPLAQLLYHFDWKTLPGISS
DSFDMTETDGVTAGRKDDLCLIATPFGLN

Transcript Sequence

Gene sequence data has not been registered.